Various functions for analysis of microbial community data
-
Updated
Apr 15, 2026 - R
Various functions for analysis of microbial community data
Constructing a null model and measuring the nestedness of bipartite networks
A library of tools useful for Lifemapper and related computations
Randomize graphs while preserving wl-colors / color refinement colors
OTU co-occurrence network inferrence base on null model for HPC
Matched-null tests for cluster-count claims: is a reported number of clusters real, or a method artifact?
Gap analysis of shark and ray range coverage by no-take marine protected areas, tested against a null model of random MPA placement.
给定多个已映射到同一节点空间的结构化视图,算出它们在哪里相同、哪里不同、差异属于哪一类(共识 / 矛盾 / 缺失 / 细化),并输出可追溯的派生结构。不判真假、不打分、不排序。 | Structural divergence between structured views over one shared node space: consensus, contradiction, omission, refinement — emitted as a traceable derived structure.
Code for Null Models used in Sinzger et al. (2019) Scientific Reports, 9, 3002
Exploratory note: trend–volatility relation as a geometric property of accumulative stochastic paths (structural null model).
Perl interface to uShuffle: shuffle sequences while preserving their k-let (k-mer) counts
Re-runnable null-calibration harness: do published ICI-response gene signatures beat size-matched random gene sets? (Lee, submitted to JITC)
Interactive null models for Powerball and California SuperLotto Plus - seeing, rather than being told, that lottery draws are fair.
Live OEIS sequence visualizer with a first-class null-model comparison layer - test whether the structure you see is in the sequence or in the rendering.
To associate your repository with the null-model topic, visit your repo's landing page and select "manage topics."