interactomics

Protein Graph Library

A python package to process protein cross-linking data.

A comprehensive user guide for pyXLMS built with Nextra.

Python program that can identify the residues interacting between chains of a complex protein.

Results, figures, and code for the manuscript of pyXLMS.

Python program which is able to analyse dssp files in order to estimate the interacting area and interacting residues between monomers of a complex protein

Pydantic version of pyXLMS [merged into main pyXLMS in v2.0.0]

A template repository for python scripts and projects using pyXLMS.

A comprehensive user guide for pyXLMS built with Nextra.

Link to the web application for pyXLMS.

Reproducible R/Quarto workflow for the analysis of the JAG1-ICD RIME-DIA proteomics dataset.

First-trimester single-cell RNA-seq analysis, followed by the hypergraph analysis to assess network topology as a marker of function.