chore: canonical organ order — Eyes after Memory, before Heart (PyAutoMind#439)

[Jammy2211]

Summary

The human ruled on 2026-09-25 that the canonical organ order is Brain, Mind, Cortex, Memory, Eyes, Heart, Hands, Nerves, Gut. Phase 0 of pyautoeyes-birth (PyAutoMind#437) appended Eyes after Gut; this moves Eyes between Memory and Heart. Nothing changes except the order.

API Changes

None — internal changes only (order of organ lists, tables and OR-chains).

Scripts Changed

• agents/_pyauto_root.py — SIBLING_ORGANS reordered (Eyes after Memory)
• bin/_pyauto_root.sh — _pyauto_is_root chain in canonical order
• ORGANISM.md, docs/concepts/organism.md — organ-table Eyes row moved after Memory; instance-organ list now Mind, Cortex, Memory, Eyes, Gut
• docs/index.md — organ list prose and the organs toctree (eyes after memory)
• README.md — organ list prose
• AGENTS.md — regenerated organism-map block

Test Plan

• pytest -n 8 (PYAUTO_* unset): 1078 passed
• ruff clean on agents/_pyauto_root.py; bash -n bin/_pyauto_root.sh

Heart readiness (YELLOW, human-acknowledged)

pyauto-heart readiness --json read 2026-09-28 (ts 2026-09-28T18:08:08Z): YELLOW, score 65, no RED reasons. Verbatim yellow reasons:

• workspace validation not passing (0 failed, 1 timeout, cloud#36404726969: autolens_test scripts/multi_dataset/rectangular.py)
• manifest drift: workspace checkouts (manifest ↔ disk) — 1 mismatch(es) vs PyAutoMind/repos.yaml
• PyAutoMemory: open PR 8d old

(plus the stale-class note release validation incomplete: no rehearsal for current source.)

Human acknowledgement, in-session 2026-09-28, naming #439: "PyAutoMemory: open PR 8d old; manifest drift: workspace checkouts (autolens_visualization unregistered — cleared by PyAutoMind#447); workspace validation timeout autolens_test multi_dataset/rectangular.py (cloud#36404726969)". None of these touch this diff (organ order only).

Merge order

1. PyAutoMind (first — repos.yaml is the source every generated block reads)
2. The rest in any order: PyAutoBrain, PyAutoHeart, PyAutoHands, PyAutoCortex, PyAutoNerves, PyAutoGut, PyAutoScientist

Hook copies in the other repos arrive by propagation after the Mind merge. pyautolabs.github.io is on the branch with no diff — no PR there.

Parallel task: autolens-visualization-rebirth (PyAutoMind#446) has PyAutoMind#447, PyAutoBrain#426 and PyAutoHeart#240 open at the same time. Heart#240 touches only the excluded: list of config/repos.yaml (disjoint from the organism group order here). Mind#447 is not fully disjoint: it rewrites the PyAutoEyes role/public_role strings in place, while this PR moves that whole block between PyAutoMemory and PyAutoHeart — whichever merges second needs a rebase that keeps #447's strings at this PR's position (and the generated organism-map blocks then regenerate from the result).

Refs PyAutoLabs/PyAutoMind#439

🤖 Generated with Claude Code

https://claude.ai/code/session_01CpGs8DxC5qA1MtHcmHeaBQ