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@PennLINC

Lifespan Informatics and Neuroimaging Center

The Lifespan Informatics and Neuroimaging Center at the University of Pennylvannia
README.md

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  1. qsiprep qsiprep Public

    Preprocessing of diffusion MRI

    Python 191 63

  2. qsirecon qsirecon Public

    Reconstruction of preprocessed q-space images (dMRI)

    Python 25 17

  3. aslprep aslprep Public

    Preprocessing of arterial spin labeling (ASL) data

    Python 64 22

  4. xcp_d xcp_d Public

    Post-processing of fMRIPrep, NiBabies, and HCP outputs

    Python 119 39

  5. CuBIDS CuBIDS Public

    Curation of BIDS (CuBIDS): A sanity-preserving software package for processing BIDS datasets.

    Python 32 13

  6. babs babs Public

    BIDS App Bootstrap (BABS)

    Python 13 8

Repositories

Showing 10 of 233 repositories
  • sypres-docs Public

    Analysis and documentation repo for SYPRES.

    PennLINC/sypres-docs's past year of commit activity
    JavaScript 1 MIT 0 2 6 Updated Sep 26, 2026
  • babs Public

    BIDS App Bootstrap (BABS)

    PennLINC/babs's past year of commit activity
    Python 13 MIT 8 57 8 Updated Sep 25, 2026
  • nibs Public

    Myelin mapping test-retest study

    PennLINC/nibs's past year of commit activity
    Python 2 MIT 0 1 0 Updated Sep 25, 2026
  • diffusion-book Public

    Diffusion MRI executable book

    PennLINC/diffusion-book's past year of commit activity
    Python 0 MIT 0 0 1 Updated Sep 25, 2026
  • trxscan-phantoms Public

    Phantom data for TRXScan simulations

    PennLINC/trxscan-phantoms's past year of commit activity
    0 0 0 0 Updated Sep 25, 2026
  • qsiprep Public

    Preprocessing of diffusion MRI

    PennLINC/qsiprep's past year of commit activity
    Python 191 BSD-3-Clause 63 71 9 Updated Sep 25, 2026
  • Meisler_ABCD_dMRI Public

    Code and Data Associated with the Meisler et al. Analysis of ABCD DWI (ABCC Release 3.1.0)

    PennLINC/Meisler_ABCD_dMRI's past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Sep 25, 2026
  • qsiplan Public

    Preprocessing workflow planning for BIDS dMRI data

    PennLINC/qsiplan's past year of commit activity
    Python 1 BSD-3-Clause 1 3 0 Updated Sep 24, 2026
  • qsirecon Public

    Reconstruction of preprocessed q-space images (dMRI)

    PennLINC/qsirecon's past year of commit activity
    Python 25 BSD-3-Clause 17 79 5 Updated Sep 24, 2026
  • CuBIDS Public

    Curation of BIDS (CuBIDS): A sanity-preserving software package for processing BIDS datasets.

    PennLINC/CuBIDS's past year of commit activity
    Python 32 MIT 13 47 13 Updated Sep 22, 2026
View all repositories

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